MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Muribacter muris
19428wC3_WT12
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 94
bases: 2,526,693 bps
CDS: 2,443
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 49
misc RNA:
Total features: 2,502
Total number of protein coding genes annotated/found:
2,443
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5037|JADGLC010000019.1
SEQF5037_00629
Genome Viewer
NA
AA
1146/382
19810-20955
Carbamoyl-phosphate synthase small chain
SEQF5037|JADGLC010000019.1
SEQF5037_00630
Genome Viewer
NA
AA
285/95
21006-21290
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00631
Genome Viewer
NA
AA
846/282
21340-22185
Trans-2%2C3-dihydro-3-hydroxyanthranilate isomerase
SEQF5037|JADGLC010000019.1
SEQF5037_00632
Genome Viewer
NA
AA
1026/342
22218-23243
Putative nuclease YhcG
SEQF5037|JADGLC010000019.1
SEQF5037_00633
Genome Viewer
NA
AA
3210/1070
23418-26627
Carbamoyl-phosphate synthase large chain
SEQF5037|JADGLC010000019.1
SEQF5037_00634
Genome Viewer
NA
AA
435/145
27293-26859
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00635
Genome Viewer
NA
AA
1047/349
27440-28486
Putative membrane-bound redox modulator Alx
SEQF5037|JADGLC010000019.1
SEQF5037_00636
Genome Viewer
NA
AA
567/189
28522-29088
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00637
Genome Viewer
NA
AA
576/192
29393-29968
General stress protein 16U
SEQF5037|JADGLC010000019.1
SEQF5037_00638
Genome Viewer
NA
AA
672/224
30020-30691
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00639
Genome Viewer
NA
AA
1263/421
32098-30836
ATP-dependent Clp protease ATP-binding subunit ClpX
SEQF5037|JADGLC010000019.1
SEQF5037_00640
Genome Viewer
NA
AA
591/197
32688-32098
ATP-dependent Clp protease proteolytic subunit
SEQF5037|JADGLC010000019.1
SEQF5037_00641
Genome Viewer
NA
AA
396/132
32799-33194
Sulfur acceptor protein CsdE
SEQF5037|JADGLC010000019.1
SEQF5037_00642
Genome Viewer
NA
AA
1161/387
34344-33184
Lipid-A-disaccharide synthase
SEQF5037|JADGLC010000019.1
SEQF5037_00643
Genome Viewer
NA
AA
1026/342
34456-35481
Adenosine deaminase
SEQF5037|JADGLC010000019.1
SEQF5037_00644
Genome Viewer
NA
AA
1083/361
35540-36622
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00645
Genome Viewer
NA
AA
1581/527
36712-38292
hypothetical protein
SEQF5037|JADGLC010000019.1
SEQF5037_00646
Genome Viewer
NA
AA
636/212
38292-38927
Thiamine import ATP-binding protein ThiQ
SEQF5037|JADGLC010000019.1
SEQF5037_00647
Genome Viewer
NA
AA
852/284
38995-39846
Cell division protein FtsN
SEQF5037|JADGLC010000019.1
SEQF5037_00648
Genome Viewer
NA
AA
318/106
39865-40182
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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